Optimized Probe Masking for Comparative Transcriptomics of Closely Related Species
نویسندگان
چکیده
منابع مشابه
Optimized Probe Masking for Comparative Transcriptomics of Closely Related Species
Microarrays are commonly applied to study the transcriptome of specific species. However, many available microarrays are restricted to model organisms, and the design of custom microarrays for other species is often not feasible. Hence, transcriptomics approaches of non-model organisms as well as comparative transcriptomics studies among two or more species often make use of cost-intensive RNAs...
متن کاملAn mRNA Blueprint for C4 Photosynthesis Derived from Comparative Transcriptomics of Closely Related C3 and C4 Species 1[W][OA]
Institute of Plant Biochemistry (A.B., J.W., M.S., D.G., K.L.W., A.P.M.W.), Institute of Plant Molecular and Developmental Biology (U.G., P.W.), and Institute of Informatics (J.M., M.J.L.), Heinrich-Heine University, 40225 Duesseldorf, Germany; Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (K.K., J.M.H.); and Bioinformatics Core, Research Technology Su...
متن کاملAn mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species.
C(4) photosynthesis involves alterations to the biochemistry, cell biology, and development of leaves. Together, these modifications increase the efficiency of photosynthesis, and despite the apparent complexity of the pathway, it has evolved at least 45 times independently within the angiosperms. To provide insight into the extent to which gene expression is altered between C(3) and C(4) leave...
متن کاملSingle-Species Microarrays and Comparative Transcriptomics
BACKGROUND Prefabricated expression microarrays are currently available for only a few species but methods have been proposed to extend their application to comparisons between divergent genomes. METHODOLOGY/PRINCIPAL FINDINGS Here we demonstrate that the hybridization intensity of genomic DNA is a poor basis on which to select unbiased probes on Affymetrix expression arrays for studies of co...
متن کاملDifferentiation of two closely related species of the genus Empoasca (Hem.: Cicadellidae)
پیشتر، گونهای زنجرک از مزارع چغندرقند استان اصفهان به اشتباه به نام Empoasca decipiens (Paoli) گزارش شده است که در این نوشتار نام صحیح آن بهصورت Empoasca meridiana Zachvatkin اعلام میگردد. گونهی اخیر دارای سینونیم شناختهتری به نام Empoasca punjabensis Singh-Pruthi میباشد. گونههای آسیایی خویشاوند گونهی E. decipiens، براساس شکل پیگوفر (pygofer) ژنیتالیای نر ازهم تفکیک میگردند، بهطوریک...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: PLoS ONE
سال: 2013
ISSN: 1932-6203
DOI: 10.1371/journal.pone.0078497